David F Glidden 7fd2f9efdc [FIX] The twin ledger was incomplete as ground truth, and the gate could not have said so
Caught by the steward asking whether CONTROL-B was PASS 2. It is not — different
document, different question — but checking the answer exposed a defect in the
correlation measurement I had just proposed.

CONTROL-B IS NOT CONTROL-A PLUS FIVE DEFECTS. The transformations overlap the two
real defects trial 04 found:
 · clause-5-out-of-scope   GONE — D4 deletes that quotation outright
 · dropped-qualifier       GONE — D1 replaces the sentence with an explicit
                           version of the same error, which is why the twin
                           carries openly what the control carried concealed
 · asserted precedence     SURVIVES, at line 51, UNLOGGED

So the twin holds six defects and the ledger recorded five. The grading rule
would have scored a correct finding on the sixth as a FALSE POSITIVE.

AND THE GATE COULD NOT HAVE CAUGHT IT. twin.py verifies that the ledger records
every DIFFERENCE between the two documents. It does not verify that the ledger
records every DEFECT in the twin. Those are different claims, and the file
asserted the second while proving only the first — a defect already present in
the control is not a difference, so it passes untouched. Fifth instance of a
check certifying a property of the code while claiming a property of the result,
this time inside the artifact built to escape that class.

Fixed: an inherited_defects list records I1 with its provenance and why it
survives; a defects_not_surviving note records the two that do not, so the twin
is never mistaken for a superset of the control; the grading rule now spans both
sets; and the gate's own output states what it does NOT establish, warning when
inherited_defects is absent — because absent is not the same as none, it means
no one has looked.

The correlation measurement can now use the twin honestly. It could not have
before this.

Note on this message: the first attempt lost three terms to shell command
substitution, because backticks in a -m string are evaluated by zsh. Amended.
Recorded rather than silently repaired, since a commit message is part of the
record and this one is about incomplete records.
2026-08-02 19:03:37 +02:00
2025-07-27 13:40:44 +02:00

🖖 David's Dotfiles - "Engage!"

"Make it so!" - A complete macOS setup system inspired by Star Trek's efficiency and elegance.

From zero to fully configured macOS in minutes. This dotfiles repository provides a comprehensive, automated setup for developers, writers, and knowledge workers.

🚀 Quick Start

One command to rule them all:

# From GitHub
git clone https://github.com/davidglidden/dotfiles.git ~/dotfiles && ~/dotfiles/engage

# From Gitea (alternative mirror)
git clone git@git.davidglidden.eu:davidglidden/dotfiles.git ~/dotfiles && ~/dotfiles/engage

That's it! The engage script will guide you through a complete system setup.

✨ What This System Provides

📦 Software Management

  • 120+ CLI tools via Homebrew (development, media, security)
  • 40+ Applications via casks (productivity, creativity, utilities)
  • 20+ Mac App Store apps via mas (native macOS apps)

🔧 Configuration Management

  • Shell setup: Zsh with Antidote, Powerlevel10k, history sync
  • Development tools: Git hooks, SSH templates, NPM config
  • Application configs: LaunchBar, Hazel, Bartender, Karabiner
  • Obsidian vault: Complete knowledge management system

🖥️ macOS System Configuration

  • System preferences: Dock, Finder, keyboard, security
  • Security hardening: Firewall, privacy, authentication
  • Keyboard shortcuts: Mission Control, app shortcuts
  • Developer settings: Safari dev tools, Terminal enhancements

🛡️ Backup & Security Strategy

  • Encrypted backups for sensitive files (SSH keys, credentials)
  • History management with daily snapshots and retention
  • Git hooks for security and code quality
  • Application data backup and restore scripts

📁 Repository Structure

dotfiles/
├── engage                     # 🖖 Master installation script
├── Brewfile                   # Package management (brew/cask/mas)
├── README.md                  # This file
├── .gitconfig                 # Git configuration
├── .npmrc                     # NPM defaults
├── .zshrc                     # Shell configuration
├── .vimrc                     # Vim configuration
├── bin/                       # Custom scripts
│   ├── backup-dotfiles        # Quick dotfiles backup
│   └── check-app-configs      # Configuration status checker
├── git/                       # Git configuration
│   └── hooks/                 # Global git hooks
├── macos/                     # macOS system configuration
│   ├── setup-macos.sh         # Master macOS setup
│   ├── defaults.sh            # System preferences
│   ├── security.sh            # Security hardening
│   └── keyboard-shortcuts.sh  # Custom shortcuts
├── macos-apps/                # macOS app configurations
│   └── backup-app-configs.sh  # App settings backup
├── obsidian/                  # Obsidian knowledge vault
│   ├── setup-obsidian.sh      # Vault configuration
│   └── community-plugins.json # Essential plugins
├── scripts/                   # Installation scripts
│   └── symlinks.sh            # Dotfile linking
├── shell/                     # Shell enhancements
│   └── history-sync.zsh       # History management
└── ssh/                       # SSH configuration
    ├── config.example         # SSH config template
    └── README.md              # SSH setup guide

🎯 Core Philosophy

This system balances automation with choice:

  • Smart defaults that work out of the box
  • Interactive modes for customization
  • Modular design - use what you need
  • Security first - encrypted backups, secure defaults
  • Documentation - clear guides and examples

Inspired by the best dotfiles repositories but designed for real-world complexity.

📱 Essential Applications Included

Development

  • iTerm2 + Kitty - Terminal emulators
  • BBEdit - Text editor with deep macOS integration
  • GitHub Desktop - Git GUI
  • Docker - Containerization

Productivity

  • Obsidian - Knowledge management powerhouse
  • 1Password - Password management
  • LaunchBar - Application launcher
  • Hazel - Automated file organization
  • Drafts - Quick capture and text processing

Utilities

  • Karabiner-Elements - Keyboard customization
  • Bartender - Menu bar organization
  • Keka - Archive utility
  • Oversight - Privacy monitoring
  • Signal - Secure messaging

Creative & Media

  • VLC - Media player
  • HandBrake - Video transcoding
  • Transmit - File transfer
  • Calibre - E-book management

🛠️ Advanced Usage

Manual Installation Steps

If you prefer granular control:

# 1. Install packages only
brew bundle install --file=~/dotfiles/Brewfile

# 2. Set up dotfiles
~/dotfiles/scripts/symlinks.sh

# 3. Configure macOS
~/dotfiles/macos/setup-macos.sh

# 4. Set up applications
~/dotfiles/macos-apps/backup-app-configs.sh

Customization

Modify the Brewfile to add/remove applications:

# Add new CLI tool
brew "your-tool"

# Add new application
cask "your-app"

# Add Mac App Store app
mas "App Name", id: 123456789

Customize macOS defaults in macos/defaults.sh:

# Change dock position
defaults write com.apple.dock orientation -string "left"

# Adjust key repeat speed
defaults write NSGlobalDomain KeyRepeat -int 1

Backup Strategy

Before making changes:

# Backup current dotfiles
~/dotfiles/bin/backup-dotfiles

# Backup macOS settings  
~/dotfiles/macos/backup-defaults.sh

# Backup sensitive files (encrypted)
~/dotfiles/backup-scripts/backup-sensitive.sh

🔐 Security Features

  • SSH keys encrypted with GPG
  • Firewall enabled with stealth mode
  • Privacy settings optimized
  • Git hooks prevent secrets in commits
  • Secure defaults for Safari and system
  • Application permissions documented

🧠 Obsidian Knowledge System

Includes a sophisticated personal knowledge management setup:

  • 13 essential plugins for advanced functionality
  • Template system with Templater integration
  • Daily/weekly/monthly review cycles
  • Christopher Alexander pattern language philosophy
  • Multilingual support (EN/ES/FR/CA)

🤝 Contributing

This is a personal dotfiles repository, but ideas and improvements are welcome:

  1. Fork the repository
  2. Create a feature branch
  3. Test thoroughly on a fresh macOS installation
  4. Submit a pull request with clear description

📜 License

MIT License - Use, modify, and share freely.

🙏 Acknowledgments

Inspired by:


Live long and prosper! 🖖

Made with ❤️ for the macOS community

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🖖 Complete macOS dotfiles system - 'Engage!'
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